Francis Robert Beattie is buried at Cave Hill Cemetery, Louisville, Kentucky.
The Higher Criticism; or, Modern Critical Theories, as to the Origin and Contents of the Literature and Religion found in the Holy Scriptures (1888)
Christian Apologetics: Inaugural Address (1890)
Radical Criticism: An Exposition of the Radical Critical Theory Concerning the Literature and Religious System of the Old Testament Scriptures (1894)
The Presbyterian Standards: An Exposition of the Westminster Confession of Faith and Catechisms (1896)
Memorial Volume of the Westminster Assembly, 1647-1897 (1897)
The Late Rev. Thomas Dwight Witherspoon, D.D., LL.D., as a Preacher (1900)
Apologetics or The Rational Vindication of Christianity (1903)